SCORER 2.0

An algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences

NB: Scorer 2.0 is a two-state classifier: if you would like a more up-to-date assessment of the oligomeric state of your coiled-coil sequence, please try LOGICOIL which is able to predict parallel oligomeric states up to tetramer and antiparallel dimers

R package now available

LINKS

SI and SOURCE CODE

REFERENCES AND INFO

R PACKAGE

Dimer_top

Dimer_side

PLEASE SELECT THE FORMAT IN WHICH YOU WISH TO ENTER YOUR INPUT

If you are unsure of which format to use, please click here

INPUT SEQUENCE:
Please select a format.

Please enter a Marcoil threshold value

INPUT SEQUENCE:
>test-sequence AIEVSQGPKGQKGDRGDSRAIEVKLANMEAEINT

INPUT SEQUENCE:
>test-sequence register abcdefga PILIADRN

Trimer_top

Trimer_side

Address enquiries to: Thomas.Vincent@bristol.ac.uk